Microbial 'omics

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A CONCEPT-type anvi’o artifact. This artifact is typically generated, used, and/or exported by anvi’o (and not provided by the user)..

Back to the main page of anvi’o programs and artifacts.

Provided by


Required or used by

anvi-display-metabolism anvi-estimate-metabolism


Kegg Orthology (KO) functional annotations, produced by finding HMM hits to the KEGG KOfam database.

You can annotate a contigs-db with these KEGG functions by running anvi-run-kegg-kofams.

Another program that relies on these annotations is anvi-estimate-metabolism, which uses them to determine presence and completeness of metabolic pathways that are defined by KOs.

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