Microbial 'omics


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layer-taxonomy-txt [artifact]

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TXT

A TXT-type anvi’o artifact. This artifact can be generated, used, and/or exported by anvi’o. It can also be provided by the user for anvi’o to import into its databases, process, and/or use..

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Most likely provided by the user.

Required or used by

anvi-import-taxonomy-for-layers

Description

This is a text file containing taxonomy information for your layers (the same information as a layer-taxonomy). You can bring this information into a single-profile-db using anvi-import-taxonomy-for-layers.

This is a tab-delimited text file that is formatted similarly to a gene-taxonomy-txt. The first column describes the names of your layers, and the following columns each correspond to the taxonomy level described in the header. Here is an example:

sample  t_domain    t_phylum    t_class     ...
 c1     Eukaryea    Chordata    Mammalia
 ...

Edit this file to update this information.