Microbial 'omics

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scgs-taxonomy-db [artifact]

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A CONCEPT-type anvi’o artifact. This artifact is typically generated, used, and/or exported by anvi’o (and not provided by the user)..

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This describes the databases downloaded from The Genome Taxonomy Database when you run anvi-setup-scg-taxonomy.

Once you have these databases, you’ll want to search the single-copy core genes in your contigs-db against them. To do this, run anvi-run-scg-taxonomy.

Edit this file to update this information.