Microbial 'omics


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scgs-taxonomy-db [artifact]

Table of Contents

CONCEPT

A CONCEPT-type anvi’o artifact. This artifact is typically generated, used, and/or exported by anvi’o (and not provided by the user)..

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Provided by

anvi-setup-scg-taxonomy

Required or used by

anvi-run-scg-taxonomy

Description

This describes the databases downloaded from The Genome Taxonomy Database when you run anvi-setup-scg-taxonomy.

Once you have these databases, you’ll want to search the single-copy core genes in your contigs-db against them. To do this, run anvi-run-scg-taxonomy.

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