Microbial 'omics

Brought to you by

anvi-export-splits-and-coverages [program]

Export split or contig sequences and coverages across samples stored in an anvi'o profile database. This program is especially useful if you would like to 'bin' your splits or contigs outside of anvi'o and import the binning results into anvi'o using anvi-import-collection program..

See program help menu or go back to the main page of anvi’o programs and artifacts.

Table of Contents


contigs-fasta coverages-txt

Requires or uses

profile-db contigs-db


No one has described the usage of this program :/ If you would like to contribute, please see previous examples here, and feel free to add a Markdown formatted file in that directory named “anvi-export-splits-and-coverages.md”. For a template, you can use the markdown file for anvi-gen-contigs-database. THANK YOU!

Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.