Microbial 'omics


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anvi-script-gen-pseudo-paired-reads-from-fastq [program]

Take a FASTQ file and convert it into 2 FASTQ files. Each read from the original FASTQ file halved, where one half is put in the R1 FASTQ and the other half is reverse complemented and put in the R2 FASTQ. If you've ended up here, things have clearly not gone very well for you, and as I write this sentence, I wholeheartedly sympathize.

See program help menu or go back to the main page of anvi’o programs and artifacts.

Table of Contents

Provides

short-reads-fasta

Requires or uses

short-reads-fasta

Usage

No one has described the usage of this program :/ If you would like to contribute, please see previous examples here, and feel free to add a Markdown formatted file in that directory named “anvi-script-gen-pseudo-paired-reads-from-fastq.md”. For a template, you can use the markdown file for anvi-gen-contigs-database. THANK YOU!

Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.