A CONCEPT-type anvi’o artifact. This artifact is typically generated, used, and/or exported by anvi’o (and not provided by the user)..
Back to the main page of anvi’o programs and artifacts.
Required or used by
There are no anvi’o tools that use or require this artifact directly, which means it is most likely an end-product for the user.
This describes the taxonomy information for the genes in your contigs-db.
You can use anvi-import-taxonomy-for-genes to import this information through a gene-taxonomy-txt, either from external data or by using software like Kaiju or Centrifuge. See this blog post for a comprehensive tutorial.
Once this information is populated, it will be displayed in most downstream interfaces, including anvi-interactive.
You can also add taxonomy information for the layers in your interface (most likely sections of your sample when analyzing a single sample) using anvi-import-taxonomy-for-layers, or at the genome or metagenome level using anvi-estimate-scg-taxonomy.
Edit this file to update this information.