Microbial 'omics


Brought to you by

anvi-delete-state [program]

Table of Contents

Delete an anvi'o state from a pan or profile database.

See program help menu or go back to the main page of anvi’o programs and artifacts.

Can provide

Can consume

pan-db profile-db state

Usage

This program, as implied by the name, is used to delete a state from a pan-db or profile-db. This way, you can remove states that are clogging up the state list in the interface.

It is generally a good idea to export your state before deleting it, just in case ((anvi-export-state)s).

To list available states in a database, call

anvi-delete-state -p pan-db \ --list-states

Then, you can easily delete a state with the command

anvi-delete-hmms -p profile-db \ -s state

Edit this file to update this information.

Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.