Download and setup Pfam data from the EBI.
This program downloads and organizes a local copy of the data from EBI’s Pfam database for use in function annotation. This program generates a pfams-data artifact, which is required to run the program anvi-run-pfams.
Set up Pfams data
By default, this data is stored at
anvio/data/misc/Pfam. To set up this data in a non-default location, run
anvi-setup-pfams --pfam-data-dir path/to/location
If you already have a pfams-data artifact and are trying to redownload this data, run
Edit this file to update this information.
Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the
__resources__ tag in this file to see an example.