Microbial 'omics


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configuration-ini [artifact]

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TXT

A TXT-type anvi’o artifact. This artifact is typically provided by the user for anvi’o to import into its databases, process, and/or use.

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Provided by

There are no anvi’o tools that generate this artifact, which means it is most likely provided to the anvi’o ecosystem by the user.

Required or used by

anvi-script-gen-short-reads

Description

This describes an INI formatted file used to configure a program.

If you’re unsure what the INI format is, you can check out its Wikipedia page. But it is essentially a text file with sections that defines the values of several keys.

As of now, it is only required in Anvi’o by the program anvi-script-gen-short-reads, where the file describes various parameters for the short reads that you want to generate, such as the desired length and coverage. Take a look at the page for that program for an example.

Edit this file to update this information.