Microbial 'omics

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anvi-import-state [program]

Import an anvi'o state into a profile database.

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Table of Contents

Can provide


Can consume

pan-db profile-db state-json


This program allows you to import a state from a state-json.

You can run this program on a profile-db or pan-db like so:

anvi-import-state -p profile-db \ -s state-json \ -n MY_STATE

This will import the state described in your state-json into your profile-db with the name MY_STATE.

Edit this file to update this information.

Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.