A simple script to generate info from search tables, given a contigs-db.
This program provides information about each of the single copy core genes in your contigs-db.
anvi-script-gen_stats_for_single_copy_core_genes.py -c contigs-db
The console output will tell you the total number of contigs, splits, and nucleotides in your contigs-db, while the text output will tell you the source, name, and e-value of each single-copy core gene.
You can get information from only single-copy core genes from a specific source. To see what sources are availible in your contigs-db, run
anvi-script-gen_stats_for_single_copy_core_genes.py -c contigs-db \ --list-sources
Edit this file to update this information.
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__resources__ tag in this file to see an example.