Microbial 'omics

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anvi-script-merge-collections [program]

Generate an additional data file from multiple collections.

See program help menu or go back to the main page of anvi’o programs and artifacts.

Table of Contents

Can provide

Can consume

contigs-db collection-txt


This program outputs a file that denotes which contigs and splits are part of which collection-txt files. This just tells you which collections each of your contigs are a part of, which can be imported as acategorical layer with anvi-import-misc-data.

This is not super useful, but it is used in the Infant gut tutorial here.

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Additional Resources

Are you aware of resources that may help users better understand the utility of this program? Please feel free to edit this file on GitHub. If you are not sure how to do that, find the __resources__ tag in this file to see an example.