Binning giant viruses and their close relatives with anvi'o (Mon, Jan 03, 2022, by tom)
A journey into the genomics of giant viruses and their close relatives miscellaneous
We use our expertise in computer science and microbiology to study the evolution and ecology of naturally occurring microbial populations through integrated 'omics and wet lab strategies.
We serve the community of microbiologists by creating advanced open-source software, by following open and reproducible science practices, and by engaging in public educational and outreach activities.
While our laboratory just recently moved to Germany 🇩🇪 to join the ranks of the Helmholtz Institute for Functional Marine Biodiversity (HIFMB) at Oldenburg, some of the members of our group continue working at our previous home in the United States 🇺🇸, University of Chicago and Marine Biological Laboratory.
Recent posts from the blog
Targeted binning of a novel nitrogen-fixing population from the Arctic Ocean (Wed, Oct 20, 2021, by iva)
Using metabolism estimation to go fishing in some ocean metagenomes. miscellaneous
From Boats to Bits: Evolution of a study on marine microbes (Mon, Sep 13, 2021, by meren)
Or, Meren's personal notes from a 48 hours, high-resolution, diel sampling effort in Hawai'i. miscellaneous
Mentorship in life sciences: voices of mentees (Tue, Jun 01, 2021, by meren)
An attempt to learn from the experiences of ECRs with their mentors miscellaneous
Integrating AGNOSTOS gene categories into anvi'o projects (Fri, May 28, 2021, by matt)
Explore the unknown! anvio
A reading list for scientists to recognize and confront anti-Black racism (Mon, Oct 05, 2020, by andrea)
miscellaneous
The history of metagenomics: An incomplete summary (Mon, Jul 27, 2020, by matt)
A personal and directed look at the past of an exciting discipline. miscellaneous
Estimating per-residue binding frequencies with InteracDome (Wed, Jul 22, 2020, by evan)
A blog post detailing InteracDome's integration into anvi'o anvio
Welcome to the dark side of genomes and metagenomes (Wed, Jul 01, 2020, by antonio)
On how we unified the known and unknown CDS-space in genomes and metagenomes miscellaneous
Online seminar series on Microbial 'Omics for beginners (Sat, Jun 27, 2020, by meren)
Socially isolated community discussions on key concepts and stuff. miscellaneous